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Intron Name: Anas_platyrhynchos_platyrhynchos_3_82857637_82859156_R

Intron Information:

Intron Rank:

155211

Intron Class:

major

Intron Phase:

Intron Coordinates:

82857637 - 82859156

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

AGCCCTGTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

0.68

0.9

73.2

37.3

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

46.1

-0.2

2.1

61.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042477

82853132 - 82859470

6339

ENSAPLT00000032838

82853132 - 82859318

6187