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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83640056_83643891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83640056 - 83643891

Intron Length:

3836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTAA

5'SS Class:

major

3'SS Sequence:

CCTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TGTTTACTAATG

Flanking Amino Acid:

SGFAFYLYKHRTRPKVQYNG

Intron Amino Acid Position:

3396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.4

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

90.7

0.91

0.6

83.6

31.4

Minor 5ss

42.2

-0.9

3.1

55.3

48.9

Minor BPS

49.3

-0.1

61.82

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477