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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83644025_83650606_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83644025 - 83650606

Intron Length:

6582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTGTTTCATT

Flanking Amino Acid:

DFGKFMLQRQGPLSADTDLS

Intron Amino Acid Position:

3352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.9

0.79

0.8

82.2

34.1

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

57.4

0.31

2.2

82.98

39.3

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002822

83639896 - 84232372

592477

ENSAPLT00000030936

83639896 - 84232372

592477