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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83650695_83651685_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83650695 - 83651685

Intron Length:

991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CAACCTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TCTTCCTCAACC

Flanking Amino Acid:

ENDNWALDGYVSSGLERGVF

Intron Amino Acid Position:

3323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

61.7

0.26

0.9

51.9

37.4

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

77.1

0.83

1.5

82.89

37.2

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477