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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83651799_83652896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83651799 - 83652896

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTCA

5'SS Class:

major

3'SS Sequence:

TTTATATTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

AATTGTTTAAAA

Flanking Amino Acid:

EASNIQLKLSGVYKKEEAHL

Intron Amino Acid Position:

3285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.6

39.2

Major BPS

79.2

0.73

75.3

39.4

Major PPT

73.8

0.54

67.9

42.4

Minor 5ss

42.7

-0.8

3.1

56.5

47.9

Minor BPS

57.3

0.23

1.8

68.19

37.9

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477