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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83653059_83655848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83653059 - 83655848

Intron Length:

2790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TCTTCCACTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TTTTCTCTATTC

Flanking Amino Acid:

EVNETITKTPVPSDVFFINS

Intron Amino Acid Position:

3231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

80.9

32.8

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

77.3

0.62

0.8

75.1

28.6

Minor 5ss

41.8

-0.9

2.5

51.7

44.8

Minor BPS

57.5

0.21

1.9

74.69

36.4

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477