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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83660923_83662020_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83660923 - 83662020

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

AAACCCTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTTTTTCTAACT

Flanking Amino Acid:

TWSGIQSECIPHACRQPETP

Intron Amino Acid Position:

3156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.48

1.3

65.4

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

70.2

0.46

0.9

62.4

38.5

Minor 5ss

39.4

-1.2

39.9

Minor BPS

66.3

0.59

1.7

83.74

37.5

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477