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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83662133_83665171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83662133 - 83665171

Intron Length:

3039

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTCATCTAATA

Flanking Amino Acid:

GIQNSSRGYEVGSTVFFRCR

Intron Amino Acid Position:

3119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.4

0.59

0.8

74.7

35.2

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

52.9

0.09

1.8

70.62

35.2

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477