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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83680599_83682403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83680599 - 83682403

Intron Length:

1805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTGTA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TTGTTTTTTATA

Flanking Amino Acid:

HWSGTLPHCSGNNPGYCDDP

Intron Amino Acid Position:

2798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

74.3

36.3

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

87.7

0.85

0.7

84.2

30.9

Minor 5ss

34.9

-1.7

3.5

49.1

47.1

Minor BPS

59.5

0.29

1.6

69.78

37.7

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477