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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83682578_83685737_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83682578 - 83685737

Intron Length:

3160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTTCCTCCGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AATATCTTACAA

Flanking Amino Acid:

LWDRSLPKCLSISCGHPGVP

Intron Amino Acid Position:

2740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

0.58

0.9

36.5

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

49.6

-0

1.7

60.84

38.6

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477