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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83685927_83700254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83685927 - 83700254

Intron Length:

14328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGGTGATGAACA

Flanking Amino Acid:

QWSSPLPNCRVVNCSDPGFV

Intron Amino Acid Position:

2677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

84.4

0.85

34.5

Major PPT

0.81

0.8

79.9

32.3

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

47.4

-0.2

2.1

62.46

43.2

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477