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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83700429_83704333_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83700429 - 83704333

Intron Length:

3905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTTCTTTTAACA

Flanking Amino Acid:

KWSGQTPVCVPITCGHPGNP

Intron Amino Acid Position:

2619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

78.4

37.9

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

87.2

0.84

0.8

84.6

28.7

Minor 5ss

41.2

-1

2.8

41.5

Minor BPS

78.7

0.9

84.25

28.8

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477