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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83717460_83725982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83717460 - 83725982

Intron Length:

8523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TTTTCTTTACAG

Flanking Amino Acid:

SNKGRPPVCKSVTCPSIETL

Intron Amino Acid Position:

2438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

74.7

41.5

Major BPS

79.5

0.73

0.9

36.9

Major PPT

92.4

0.95

0.6

87.4

23.1

Minor 5ss

37.6

-1.4

2.8

47.1

41.6

Minor BPS

63.6

0.29

1.8

72.3

40.7

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477