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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83733739_83739432_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83733739 - 83739432

Intron Length:

5694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATT

Flanking Amino Acid:

SKKGFKIRYSAPYCSLNPIL

Intron Amino Acid Position:

2313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

90.9

28.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

Minor 5ss

47.2

-0.3

2.7

68.8

41.8

Minor BPS

78.1

0.96

86.75

33.6

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477