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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83739580_83743816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83739580 - 83743816

Intron Length:

4237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCATCTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTCTTTATTC

Flanking Amino Acid:

KQFDELEVFDGSSGQSPLLV

Intron Amino Acid Position:

2264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

72.1

0.5

75.8

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

73.1

0.7

1.5

81.83

32.8

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477