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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83744006_83751810_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83744006 - 83751810

Intron Length:

7805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

GTATACTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTATTCTTATTT

Flanking Amino Acid:

QFEGSSPFCEAQCPANEIRT

Intron Amino Acid Position:

2201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.8

0.49

0.9

62.7

43.7

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

0.49

1.6

75.9

41.4

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477