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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83752179_83754452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83752179 - 83754452

Intron Length:

2274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTTTG

5'SS Class:

major

3'SS Sequence:

ATTAACTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTCAATTAACT

Flanking Amino Acid:

TGGFFVLNFHAYQLKKCQPP

Intron Amino Acid Position:

2136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.56

1.3

71.5

41.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

77.6

0.62

0.9

70.2

40.2

Minor 5ss

39.4

-1.2

2.8

42.6

Minor BPS

67.2

0.62

1.8

88.42

35.5

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477