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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83754599_83757044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83754599 - 83757044

Intron Length:

2446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTCTTCATCT

Flanking Amino Acid:

TEPVNDYIAVWDGPDHNSPQ

Intron Amino Acid Position:

2087

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.68

0.7

73.4

31.5

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

62.4

0.47

1.8

82.64

38.7

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477