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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83757223_83767151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83757223 - 83767151

Intron Length:

9929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

NWNYHFPRCEAPCGYNVTAQ

Intron Amino Acid Position:

2028

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

84.2

27.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.7

0.92

0.7

88.7

28.3

Minor 5ss

44.8

-0.6

2.8

61.7

43.1

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477