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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83776007_83779591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83776007 - 83779591

Intron Length:

3585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTATTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATTTGAATT

Flanking Amino Acid:

TWKISLPIGYGAHIQFLNFS

Intron Amino Acid Position:

1895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.7

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.9

0.65

0.9

73.1

37.2

Minor 5ss

35.2

-1.7

2.7

39.3

40.3

Minor BPS

58.5

0.35

1.4

73.95

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477