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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83779709_83783673_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83779709 - 83783673

Intron Length:

3965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGGATA

5'SS Class:

major

3'SS Sequence:

TTACTTTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTACTTTTAACA

Flanking Amino Acid:

RWNYPSPLCIAKCGGTLTNM

Intron Amino Acid Position:

1856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

73.1

37.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.3

0.68

0.9

77.1

35.6

Minor 5ss

42.1

-0.9

3.1

53.5

45.8

Minor BPS

72.9

0.72

1.1

77.26

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477