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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83783744_83788013_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83783744 - 83788013

Intron Length:

4270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTCTT

5'SS Class:

major

3'SS Sequence:

CCTTTCCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

AGTATCTAAAAT

Flanking Amino Acid:

FQCEPGYTLQGRSHISCMPG

Intron Amino Acid Position:

1833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

76.3

38.9

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

70.6

0.46

0.9

66.3

33.5

Minor 5ss

46.3

-0.4

2.8

67.8

43.1

Minor BPS

50.4

0.09

1.8

69.02

41.4

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477