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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83788133_83796619_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83788133 - 83796619

Intron Length:

8487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGACTG

5'SS Class:

major

3'SS Sequence:

TTACTTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTGTTTTTACTT

Flanking Amino Acid:

AAAGFHLEYKTVGLAACPEP

Intron Amino Acid Position:

1793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.2

41.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

82.1

0.72

0.8

30.7

Minor 5ss

37.3

-1.4

3.2

48.8

41.2

Minor BPS

63.3

0.5

1.6

78.42

39.1

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477