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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83810192_83812069_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83810192 - 83812069

Intron Length:

1878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GCCTGTTTAATT

Flanking Amino Acid:

LLSSLSGSHSGETLPLATSN

Intron Amino Acid Position:

1584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

87.7

27.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

33.9

-1.8

3.3

47.8

47.9

Minor BPS

55.8

0.26

1.8

67.55

44.3

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477