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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83815086_83823708_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83815086 - 83823708

Intron Length:

8623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGTACC

5'SS Class:

major

3'SS Sequence:

GTTTTGATTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTGTTTTGATT

Flanking Amino Acid:

AWNRALPSCNAPCGGQYTGS

Intron Amino Acid Position:

1507

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

71.8

37.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.7

0.67

70.4

44.5

Minor 5ss

43.6

-0.7

2.5

56.2

41.1

Minor BPS

60.2

0.4

1.3

73.17

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477