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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83829997_83830781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83829997 - 83830781

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTAGC

5'SS Class:

strong_major

3'SS Sequence:

TACATTGTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTCTTTTTACAT

Flanking Amino Acid:

FWQPDPPTCIAACGGNLTGP

Intron Amino Acid Position:

1333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

78.1

36.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

65.3

0.34

1.1

60.5

44.5

Minor 5ss

36.1

-1.6

2.7

46.4

41.8

Minor BPS

57.9

0.33

1.7

75.95

41.3

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477