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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83842811_83845012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83842811 - 83845012

Intron Length:

2202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGCT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

IIEADPGKTISLHFIVFDTE

Intron Amino Acid Position:

1201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

72.3

37.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

33.6

-1.9

3.5

50.5

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477