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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83849745_83871265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83849745 - 83871265

Intron Length:

21521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CCCTTCCCACTT

Flanking Amino Acid:

TDQGFQLTYTSFDLVKCEDP

Intron Amino Acid Position:

1095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

86.3

0.82

0.8

83.9

31.1

Minor 5ss

37.8

-1.4

2.7

46.1

Minor BPS

40.2

-0.6

1.9

51.34

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477