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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83871423_83879407_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83871423 - 83879407

Intron Length:

7985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTACAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

AGTTTCATACTA

Flanking Amino Acid:

FQLREGDIVKVYDGKDSSSR

Intron Amino Acid Position:

1043

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

68.9

0.42

1.1

69.3

40.9

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

-0

1.8

62.94

37.4

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477