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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83879578_83896630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83879578 - 83896630

Intron Length:

17053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

CTGTCTCCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

VWSAPLPRCVAECGATVSGN

Intron Amino Acid Position:

986

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

67.1

44.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.3

0.59

0.8

74.1

Minor 5ss

32.6

-2

3.5

40.1

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477