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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83898626_83902067_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83898626 - 83902067

Intron Length:

3442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

AATATGTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCCTTTTTAATA

Flanking Amino Acid:

TWTIEVSHGKGVHLVFHTFH

Intron Amino Acid Position:

851

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

62.1

0.27

1.2

44.3

Minor 5ss

37.6

-1.4

44.8

42.9

Minor BPS

69.1

0.6

1.2

69.67

37.9

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477