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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8391318_8397019_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8391318 - 8397019

Intron Length:

5702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

CATCTTAGAAAT

Flanking Amino Acid:

WLEENIVNSEGNIIVYGNTI

Intron Amino Acid Position:

811

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

75.5

34.4

Major BPS

67.6

0.44

1.2

Major PPT

0.59

0.7

74.2

Minor 5ss

32.4

-2

3.9

48.7

47.8

Minor BPS

43.1

-0.4

1.7

57.5

38.6

Associated Gene:

Gene:

CFAP61

Ensembl Gene ID:

ENSAPLG00000013456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014012

8383015 - 8465019

82005