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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83926939_83928090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83926939 - 83928090

Intron Length:

1152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTAATAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAA

U12 Branch Point Sequence:

TTTGTTTTAATA

Flanking Amino Acid:

TGRGFNITYTTFGQNECHDP

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.9

29.9

Major BPS

69.5

0.49

1.2

63.7

43.9

Major PPT

66.1

0.36

1.2

73.5

40.2

Minor 5ss

35.5

-1.6

44.2

37.3

Minor BPS

71.7

0.68

1.3

33.3

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002822

83639896 - 84232372

592477

ENSAPLT00000030936

83639896 - 84232372

592477