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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83928418_83930231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83928418 - 83930231

Intron Length:

1814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGAATT

5'SS Class:

major

3'SS Sequence:

TTGTTTTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ATTTTGAGAATA

Flanking Amino Acid:

QWSGNKPSCVFSCFFNFTTP

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

79.3

33.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.8

0.81

0.7

85.6

29.2

Minor 5ss

-0.9

3.2

64.6

40.6

Minor BPS

44.7

-0.4

2.2

63.12

37.2

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477