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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83930415_83952919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83930415 - 83952919

Intron Length:

22505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTCCTTACTA

Flanking Amino Acid:

GSPGFKAVYQEIEKGGCGDP

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

80.8

0.69

0.9

78.5

39.2

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

78.5

0.89

1.5

87.11

31.6

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002822

83639896 - 84232372

592477

ENSAPLT00000030936

83639896 - 84232372

592477