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Intron Name: Anas_platyrhynchos_platyrhynchos_3_83956478_84005961_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

83956478 - 84005961

Intron Length:

49484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTCATTGTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GCTTTTTGAAAT

Flanking Amino Acid:

WVITTTDPEKVIKLAFEEFE

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.5

Major BPS

100

1.24

0.5

100

Major PPT

69.2

0.43

65.7

39.8

Minor 5ss

70.5

0.69

2.2

81.8

38.5

Minor BPS

55.6

0.25

1.5

70.27

40.6

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477