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Intron Name: Anas_platyrhynchos_platyrhynchos_3_84006084_84011059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84006084 - 84011059

Intron Length:

4976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAAAA

Flanking Amino Acid:

AWSDHRPICRARTCGSNLRG

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

32.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.8

0.69

0.8

78.8

34.4

Minor 5ss

-1.9

3.5

48.2

47.9

Minor BPS

62.8

0.4

1.9

79.52

35.6

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477