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Intron Name: Anas_platyrhynchos_platyrhynchos_3_84020497_84070226_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84020497 - 84070226

Intron Length:

49730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

CTTTTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACCT

Flanking Amino Acid:

SKDSNHKNSVLTQGGDAVAS

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

72.1

40.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

95.3

1.02

0.5

91.7

19.4

Minor 5ss

44.8

-0.6

2.9

68.2

42.5

Minor BPS

74.2

0.84

1.5

90.89

33.1

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477