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Intron Name: Anas_platyrhynchos_platyrhynchos_3_84070305_84088125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84070305 - 84088125

Intron Length:

17821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TCTCCTTTATCT

Flanking Amino Acid:

RRKGFNAQFQVKKAIELKSR

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

80.7

33.7

Major BPS

0.75

78.6

Major PPT

85.2

0.79

0.8

83.9

31.1

Minor 5ss

33.7

-1.9

3.3

47.7

Minor BPS

66.5

0.59

1.6

81.06

40.9

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477