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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8416472_8431282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8416472 - 8431282

Intron Length:

14811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTGTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TTGTTGTGTACA

Flanking Amino Acid:

APSEQVSKDQPSYSLNHINR

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

77.5

32.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

77.3

0.61

72.2

42.7

Minor 5ss

29.2

-2.4

2.9

35.3

41.5

Minor BPS

44.9

-0.4

2.4

63.15

43.1

Associated Gene:

Gene:

CFAP61

Ensembl Gene ID:

ENSAPLG00000013456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014012

8383015 - 8465019

82005