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Intron Name: Anas_platyrhynchos_platyrhynchos_3_84217302_84229808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84217302 - 84229808

Intron Length:

12507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TCAGCAGTAATC

Flanking Amino Acid:

SWDFPVPFCRAEGACGGTLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

78.4

0.64

0.9

35.1

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

44.6

-0.4

2.2

55.77

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477