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Intron Name: Anas_platyrhynchos_platyrhynchos_3_84230004_84232275_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84230004 - 84232275

Intron Length:

2272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAGGAGAC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTGACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTGACA

Flanking Amino Acid:

SIIYGDKKSYLLPSHTCGNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.26

1.1

55.1

36.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.5

0.8

0.9

83.5

31.6

Minor 5ss

31.9

-2.1

3.7

46.5

43.6

Minor BPS

71.5

0.67

1.1

79.17

Associated Gene:

Gene:

CSMD1

Ensembl Gene ID:

ENSAPLG00000002718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030936

83639896 - 84232372

592477

ENSAPLT00000002822

83639896 - 84232372

592477