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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8455272_8460797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8455272 - 8460797

Intron Length:

5526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCAG

5'SS Class:

major

3'SS Sequence:

CTCTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

CATTACATAATC

Flanking Amino Acid:

YHPQLHVRKARLEDYNDLMP

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

62.4

43.6

Major BPS

73.9

0.59

30.2

Major PPT

86.9

0.83

0.6

83.2

25.4

Minor 5ss

30.2

-2.3

3.2

38.2

46.7

Minor BPS

54.1

0.11

1.8

65.67

39.7

Associated Gene:

Gene:

CFAP61

Ensembl Gene ID:

ENSAPLG00000013456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014012

8383015 - 8465019

82005