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Intron Name: Anas_platyrhynchos_platyrhynchos_3_8460925_8461549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8460925 - 8461549

Intron Length:

625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTCTCCTAACA

Flanking Amino Acid:

LLFIPADENLEPGLESAFEK

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.2

0.7

0.9

37.8

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

61.4

0.35

1.7

73.2

38.4

Associated Gene:

Gene:

CFAP61

Ensembl Gene ID:

ENSAPLG00000013456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014012

8383015 - 8465019

82005