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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85177882_85183183_F

Intron Information:

Intron Rank:

127232

Intron Class:

major

Intron Phase:

Intron Coordinates:

85177882 - 85183183

Intron Length:

5302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATCAAA

U12 Branch Point Sequence:

TCCTGCTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

59.9

0.25

1.2

34.4

Major PPT

88.9

0.88

0.7

88.2

29.1

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

55.2

0.24

1.9

72.16

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019695

85158000 - 85183287

25288