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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85307451_85309834_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85307451 - 85309834

Intron Length:

2384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TTTACTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTACTTCTACA

Flanking Amino Acid:

MGAKVSKTFNKHVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

78.9

34.8

Major BPS

0.65

1.5

85.7

34.9

Major PPT

86.2

0.81

0.7

80.5

31.4

Minor 5ss

36.6

-1.5

3.3

50.4

39.9

Minor BPS

54.5

0.13

1.9

72.49

39.1

Associated Gene:

Gene:

MCPH1

Ensembl Gene ID:

ENSAPLG00000018704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035346

85307439 - 85427443

120005