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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85314249_85314826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85314249 - 85314826

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTATCCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACATACTTAAGC

Flanking Amino Acid:

VYNNEGLLLKHKCMQPKDFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

79.1

24.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

69.2

0.43

0.9

59.9

41.9

Minor 5ss

35.8

-1.6

2.8

40.3

40.1

Minor BPS

55.1

0.14

1.8

62.63

42.5

Associated Gene:

Gene:

MCPH1

Ensembl Gene ID:

ENSAPLG00000018704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035346

85307439 - 85427443

120005