Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_85367406_85369197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85367406 - 85369197

Intron Length:

1792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATATTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAT

Flanking Amino Acid:

NEITKLQEKNSFLEKRVLEM

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.6

0.58

1.1

80.9

35.1

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

65.1

0.55

1.6

84.45

36.3

Associated Gene:

Gene:

ANGPT2

Ensembl Gene ID:

ENSAPLG00000005668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005903

85350952 - 85395176

44225