Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_85371620_85393960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85371620 - 85393960

Intron Length:

22341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

ATGCAACTATCT

Flanking Amino Acid:

MENNTQWLMKLENYIQDSMK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

75.3

0.57

0.8

70.7

29.2

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

-0.6

2.1

59.38

Associated Gene:

Gene:

ANGPT2

Ensembl Gene ID:

ENSAPLG00000005668

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005903

85350952 - 85395176

44225