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Intron Name: Anas_platyrhynchos_platyrhynchos_3_85588873_85590969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85588873 - 85590969

Intron Length:

2097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTTG

5'SS Class:

major

3'SS Sequence:

TTTTATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGCTTTTATTT

Flanking Amino Acid:

AVLSGFPQLQAFKTKMSNVP

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

71.6

40.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

89.7

0.89

0.7

89.1

27.3

Minor 5ss

47.5

-0.2

2.8

64.6

46.7

Minor BPS

56.1

0.27

1.5

72.24

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046321

85588747 - 85596451

7705

ENSAPLT00000005463

85588747 - 85596894

8148